CDS

Accession Number TCMCG056C15456
gbkey CDS
Protein Id XP_031386866.1
Location complement(join(39151582..39151794,39151906..39152032,39152430..39152668,39152794..39153008,39153435..39153897,39154084..39154237,39154428..39154537,39154964..39155221,39155754..39155807,39155909..39156019,39156110..39156265,39156825..39157215,39157418..39157485,39157931..39158041,39158174..39158374,39158602..39158703,39159059..39159169,39159282..39159457,39159919..39159997,39160248..39160322,39160425..39160685,39160831..39161088,39161699..39161833))
Gene LOC116200214
GeneID 116200214
Organism Punica granatum

Protein

Length 1355aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA580467
db_source XM_031531006.1
Definition DExH-box ATP-dependent RNA helicase DExH11 isoform X1 [Punica granatum]

EGGNOG-MAPPER Annotation

COG_category A
Description helicase
KEGG_TC -
KEGG_Module M00392        [VIEW IN KEGG]
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko03019        [VIEW IN KEGG]
KEGG_ko ko:K12599        [VIEW IN KEGG]
EC -
KEGG_Pathway ko03018        [VIEW IN KEGG]
map03018        [VIEW IN KEGG]
GOs GO:0000184        [VIEW IN EMBL-EBI]
GO:0000288        [VIEW IN EMBL-EBI]
GO:0000291        [VIEW IN EMBL-EBI]
GO:0000956        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003724        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004004        [VIEW IN EMBL-EBI]
GO:0004386        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005773        [VIEW IN EMBL-EBI]
GO:0005829        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006401        [VIEW IN EMBL-EBI]
GO:0006402        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006810        [VIEW IN EMBL-EBI]
GO:0006811        [VIEW IN EMBL-EBI]
GO:0006812        [VIEW IN EMBL-EBI]
GO:0006813        [VIEW IN EMBL-EBI]
GO:0008026        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008186        [VIEW IN EMBL-EBI]
GO:0009056        [VIEW IN EMBL-EBI]
GO:0009057        [VIEW IN EMBL-EBI]
GO:0009892        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010035        [VIEW IN EMBL-EBI]
GO:0010038        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010605        [VIEW IN EMBL-EBI]
GO:0010608        [VIEW IN EMBL-EBI]
GO:0010629        [VIEW IN EMBL-EBI]
GO:0015672        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016071        [VIEW IN EMBL-EBI]
GO:0016441        [VIEW IN EMBL-EBI]
GO:0016458        [VIEW IN EMBL-EBI]
GO:0016462        [VIEW IN EMBL-EBI]
GO:0016787        [VIEW IN EMBL-EBI]
GO:0016817        [VIEW IN EMBL-EBI]
GO:0016818        [VIEW IN EMBL-EBI]
GO:0016887        [VIEW IN EMBL-EBI]
GO:0017111        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0019439        [VIEW IN EMBL-EBI]
GO:0030001        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0034427        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034655        [VIEW IN EMBL-EBI]
GO:0035864        [VIEW IN EMBL-EBI]
GO:0040029        [VIEW IN EMBL-EBI]
GO:0042221        [VIEW IN EMBL-EBI]
GO:0042623        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043928        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044248        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044265        [VIEW IN EMBL-EBI]
GO:0044270        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0046700        [VIEW IN EMBL-EBI]
GO:0048519        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051179        [VIEW IN EMBL-EBI]
GO:0051234        [VIEW IN EMBL-EBI]
GO:0055087        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070035        [VIEW IN EMBL-EBI]
GO:0070478        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0140098        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901361        [VIEW IN EMBL-EBI]
GO:1901575        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGAACCGATCGAAGCGGCGAACGGGCTGTCCTTCCGGGTCGGGTTCTCAGGCCACAGCGGCCATCTCCGCCTCGAGCCTCTCTCCACCGTTGAGCGCGCGAACCCCGTGAACTCCGTCCCCGATTTCATCCTCCCTCCTGCATTCATCGAGGAAACTCAAGAATCAATTAAGGCATACATAGAGGAGAAATATCTTCGGCCGAATTTGGATGCTGAGGAGTTCTCTCCCGAGAAAGCTGGAAGAGATTGGGAGTTCGACTGGTTTGACAAGGCGAAAGTACCCCTAGAACCGTCATTGCCGCGATCTGTTGTGGTACCAGTGTGGGAGTTACCATTTAGACGTCAAGCAAAGCTTTCAGGGTCACAAATATGGGAACCCGACTCACTGGAGGTCGATATCTCCAAGTTAACCTCAGGGGTTCAAGATTCTGGTTCATTGCCCCGCATTACTGGGCCTCCAAAAGATTTTATGAGGGGAAGCATCAGCAATCGGCCTTTCCGTCCTGGTGGTTTGGATGATTCACAATCCTTTGAAAGAACTCTTCCTGATGGAGCATTAAATGGTGAATGGGCACGTGAACTTCTGAATGGGGGTTCTGCTCAATCTGTTCCTCCTAGCTTTAAGCAAGGCTTGCACCTTGGAGACCTCAAGGCGCATCCATGTTCATGGACTGTGTATAAGGAGCAAGGTTCAGCCAAGAGATTACCAGATGAAAGAGAAAAGATGGTCGAGCTTTCTGTACAGTTTGATGACTTGTTCAAGAAAGCTTGGGAAGATGATACAACTGCAGATTATGAGGAAGAGGCTCATTTGTCAGATCACGAGCCTACTGTACCAGAAGCAGAAACAGATGAGATTGATGCACAAGGCCAGATGCGTTCACTTGGAGTGCCCTTGTTGGATGAAATATTGTCCGATGAATTAGGAGGAACAGCAGTTAAATCAGGGGAAAAGAACCCTAACGATGGACGTCAGCAGGAGGGGCAGGTGTGGGCTATCACTGCAGAGGATGGGATTGCAGATCACTTTCATGAACTTGTCCCCGACATGGCACTTGAATTTCCCTTTGAATTGGATAAATTCCAAAAGGAGGCTATCTACTGTCTTGAAAGAGGTGATTCAGTCTTTGTTTCAGCTCATACATCAGCTGGAAAGACAGTTGTTGCTGAATATGCATTTGCTTTGGCTTCAAAGCATTGCACGCGAGCAATATATACAGCTCCTATCAAGACCATCAGCAATCAAAAGTACAGGGATTTCTGTGGGAAATTTGATGTTGGCCTTCTTACTGGTGATATTAGCTTGAGGCCAGAGGCTTCATGTCTTATTATGACCACCGAAATTTTAAGGTCAATGCTTTATCGAGGGGCTGATATCATTCGTGATATTGAATGGGTTATATTCGATGAAGTACACTATGTTAATGATGCTGAAAGAGGTGTTGTTTGGGAAGAAGTAATCATCATGCTCCCAAGACATGTCAATATCATTCTCCTTTCTGCCACGGTACCTAACACAATGGAATTTGCTGATTGGATTGGCCGGACAAAGCAGAAAAAAATTCGTGTCACAGGGACTACTAAAAGACCAGTACCACTGGAACACTGCTTGTTTTACTCTGGAGAACTTTACAGAATATGCGAAAGTGAAATTTTCATCCAACAGGGATTGAGAGCTGCAAGAGATGCATTCAAGAAGAAGAATGCTCCTCCAGGTGGGGCTGGTAATGGGCCAAAGGCTGGCCCTTCACCAGTTCGTGGTGGAGGTCAAGGAGAGAAGTGTGAAAATTTCAGTCGCGGAAAGCTAAATAAGCATTCTGGTGCCCATAATTTGGGTAAAAGCTCTGGGAATGGCGCAGGAAATCAGGGCAATGGTAATGGCGATAACAACTGGGGTTTGAGAAGATCAGAAGCATCTTTGTGGCTGCAGCTTATTAACAAGTTATCTAAGAAGTCCCTATTGCCAGTGGTGGTGTTTTGCTTCTCCAAGAATCGATGTGACAGATCAGCCGATAGTTTAACTGGGACTGATCTCACAAGCTCTTCTGAGAAAAGTGAGATACGTGTTTTCTGCGACAAAGCATTTTCACGGTTGAAGGGATCTGACCGGAATTTGCCACAGATTGTTAGAATCCAAAGCCTTCTTCGGAGGGGGATCGGTGTACACCATGCAGGTCTGCTCCCAATTGTTAAGGAAGTTATTGAAATGCTTTTCTGCCGAGGTGTTATTAAGGTGTTGTTTTCTACAGAGACATTTGCTATGGGGGTTAATGCCCCAGCAAGAACAGTTGTATTTGACTCGCTGAGGAAGTTTGACGGGAAAGATTTTAGAGAATTACTCCCTGGAGAATACACTCAAATGGCTGGACGTGCTGGGAGAAGGGGCCTCGACAAATTTGGTACAGTTATCGTGATGTGCCGTGATGAAATCCCAGAAGAAAGTAATTTGAGGCATGTCATTGTTGGTAGTGCGACTAAGCTAGAATCTCAATTTCGGCTGACCTATATTATGATCCTTCATCTCCTTCGTGTTGAAGAACTGAAGGTAGAGGATATGTTGAAAAGAAGTTTTGCTGAATTTCATGCTCAGAAGGGTTTGTCTGAAACTCACACACTCCTAAAGACGATGCTTGATCAGCCTACAAAATCAATAGAATGTATAAAAGGTGAACCAGCAATCAAAGAATACTATGAGATGCATGAGGAAGCTGAGCGTCTCAACAATGACATAGCAGACTCGGTCATGCAGTCCCCTGTTGCCGCGCACTTCCTTACTCCTGGAAGAGTTGTAGTTGTGAAATGCCAGTCTGGCCAGGACCATTTTCTTGGAGTTGTCATTGAAGCAGAGGCTGGAAAAAGGCAATATATTGTCTTAACGCTAAGACCTGACTTAGCACCAACAGTACAAAGTTCTCCTGGCAGCGGCAACCTACAGGATGTAAAGGTTTCTGAATTCCAACAAGGTTCTTTCCTGCTACCAAAGTCAAAACGTCGTATAGAGGAAGAATATGATTCTGCTTTTACTTCTCGAAAACGATCTGGTGCCATTAGAATACAATTGCCCCATCACGGTGCTGCTTCTGGGATGAGTTATGAGGTTAGAAGAGTTGAGACCAGGGAATTTCTGTTCATGTGCTCTAAAAGGATTCAGGTTAATCAAGTTGGACTTCTTGAAGACGATAGCGCTGCTGCTTACTCCAAGACTGTTCAACAGCTTTTGGATTTGAAGTCTGGCAGAAGTAAATATCCACCAGCTCTGGATCCAGTGAAAGATTTGAAGTTGAAAGATGTTGAATTGGTGAATAAATATCGCCAACGGGACACGCTGTTGCGGAAGATGACAGAGAATAAGTGTCATGGATGTATAAAATTAGCGGAGCACATGAAGTTAGCAGAGGAGATAAGGAAGCACAAGGAAAAGGTTGCTGAACTCAAATTTCAAATGTCAGATGAAGCCCTGCAGCAGATGCCAGAGTTTCAGGGCCGGGTGGAAGTCCTGAAGAAGATTGGGTGCATAGATGCTGATCTTGTCGTTCAGCTAAAAGGTCGTGTTGCTTGTGAGATGAACTCAGGGGAAGAGTTGATATGCACAGAGTGTTTGTTTGATAATCAACTCGACTGCTTGGAACCAGAAGAAGCAGTAGCTTTAATGTCCGCTTTCGTGTTTCAACAAAGGAATACTTCTGAACCAACCCTTACGCCAAAGCTATTGGAGGCTAGACAAAGGTTACACGAAACAGCAATAAGACTCGGCCAGCTTCAAGTTGAGCTCGGGCTACCAATAAGCCCTGAGGAGTATGCTCAGGAGAACCTCAAGTTTGGTCTGGTCGAAGTTGTTTACGAATGGGCAAAGGGCACTCCATTTGCCGACATATGCAAGCTCACAGACGTCCCCGAAGGCCTTATAGTACGAACTATCGTCAGGCTCGACGAGACATGTCGTGAATTTAAGAATGCTGCCTCTATTATGGGAAATTCTGCACTACACAAGAAGATGGAAGCTGCTTCGAATGCAATAAAGCGAGATATCGTGTTTGCTGCTAGCTTGTATATCACAGGAGTTTAA
Protein:  
MEPIEAANGLSFRVGFSGHSGHLRLEPLSTVERANPVNSVPDFILPPAFIEETQESIKAYIEEKYLRPNLDAEEFSPEKAGRDWEFDWFDKAKVPLEPSLPRSVVVPVWELPFRRQAKLSGSQIWEPDSLEVDISKLTSGVQDSGSLPRITGPPKDFMRGSISNRPFRPGGLDDSQSFERTLPDGALNGEWARELLNGGSAQSVPPSFKQGLHLGDLKAHPCSWTVYKEQGSAKRLPDEREKMVELSVQFDDLFKKAWEDDTTADYEEEAHLSDHEPTVPEAETDEIDAQGQMRSLGVPLLDEILSDELGGTAVKSGEKNPNDGRQQEGQVWAITAEDGIADHFHELVPDMALEFPFELDKFQKEAIYCLERGDSVFVSAHTSAGKTVVAEYAFALASKHCTRAIYTAPIKTISNQKYRDFCGKFDVGLLTGDISLRPEASCLIMTTEILRSMLYRGADIIRDIEWVIFDEVHYVNDAERGVVWEEVIIMLPRHVNIILLSATVPNTMEFADWIGRTKQKKIRVTGTTKRPVPLEHCLFYSGELYRICESEIFIQQGLRAARDAFKKKNAPPGGAGNGPKAGPSPVRGGGQGEKCENFSRGKLNKHSGAHNLGKSSGNGAGNQGNGNGDNNWGLRRSEASLWLQLINKLSKKSLLPVVVFCFSKNRCDRSADSLTGTDLTSSSEKSEIRVFCDKAFSRLKGSDRNLPQIVRIQSLLRRGIGVHHAGLLPIVKEVIEMLFCRGVIKVLFSTETFAMGVNAPARTVVFDSLRKFDGKDFRELLPGEYTQMAGRAGRRGLDKFGTVIVMCRDEIPEESNLRHVIVGSATKLESQFRLTYIMILHLLRVEELKVEDMLKRSFAEFHAQKGLSETHTLLKTMLDQPTKSIECIKGEPAIKEYYEMHEEAERLNNDIADSVMQSPVAAHFLTPGRVVVVKCQSGQDHFLGVVIEAEAGKRQYIVLTLRPDLAPTVQSSPGSGNLQDVKVSEFQQGSFLLPKSKRRIEEEYDSAFTSRKRSGAIRIQLPHHGAASGMSYEVRRVETREFLFMCSKRIQVNQVGLLEDDSAAAYSKTVQQLLDLKSGRSKYPPALDPVKDLKLKDVELVNKYRQRDTLLRKMTENKCHGCIKLAEHMKLAEEIRKHKEKVAELKFQMSDEALQQMPEFQGRVEVLKKIGCIDADLVVQLKGRVACEMNSGEELICTECLFDNQLDCLEPEEAVALMSAFVFQQRNTSEPTLTPKLLEARQRLHETAIRLGQLQVELGLPISPEEYAQENLKFGLVEVVYEWAKGTPFADICKLTDVPEGLIVRTIVRLDETCREFKNAASIMGNSALHKKMEAASNAIKRDIVFAASLYITGV